Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891198.1_cds_XP_016445936.1_40845
CDS Infomation

[gene=LOC107771125] [db_xref=GeneID:107771125] [protein=acyl-coenzyme A oxidase 2, peroxisomal-like] [protein_id=XP_016445936.1] [location=join(27680..28134,29797..29912,30481..31361,31485..31664,31755..31921,31997..32120,32510..32671)] [gbkey=CDS]
Sequence

ATGGAGCTTCAAAAGATCAGCTCAAAGGGTGTCCAGAACACTGAAGAAAATCAAGAAACC
GTAAACCGGCGAATCCAACGGTTGACTTTACATCTGAACCCGGTTCAGGACATCACCCCG
GTCCACTTAGAGCTGCTAACGTGCGCGTCGGGGAAGGCGAAGACGATTAACGTGAGCACT
GTAACACTGTCGGAATACATGAGAGGGAAGCATAGGGATATACAAGAACAAGTTTATGCT
TACTTCAATTCAAGACCTGAACTTCAGACGCCAATTGAGATATCAAAAGATGAACACAGA
GAATTGTGCATGAAACAACTTGTGGGGTTGGTAAGAGAAGGTGGGATAAGGCCGTTTAGG
TATGTGGCTGAAGATCCGGCTAAGTATTTTGCTATTGCTGAAGCTGTTGGAAGTGTTGAC
ATGTCACTTGGCATCAAAATGGGTGTTCAGTACAGTCTTTGGGGAGGTTCTGTTATCAAC
TTGGGAACTAAAAAGCACAGAGACAAATATTTTAATGGTATAGACAATGTGGACTACCCT
GGCTGCTTTGCAATGACAGAACTTCATCATGGTTCAAATGTTCAAGGTCTTCAGACAATT
GCCACCTTTGATCCTCTCACAGATGAATTCATAATTGACACGCCAAATGATGGGGCCTTA
AAGTGGTGGATTGGTAATGCTGCTGTTCATGGAAAATTTGCAACAGTTTTTGCAAAACTG
ATGTTACCAACTCATGATACAAAAGGTGTTACCGACATGGGCGTTCATGCATTTATTGTT
CCGATAAGGGATATGAAGATCCACAAGACATTACCAGGGGTTGAAATACATGATTGTGGC
CATAAAGTTGGCTTGAATGGAGTAGATAATGGTGCATTGAGATTTCGCTCAGTAAGAATT
CCACGAGATAACCTTCTTAATCGATTTGGAGACGTCTCACGGGATGGGAAATACACTAGC
AGCCTGCCTTCAATCAGCAAAAGATTTGCTGCCACACTTGGAGAACTTGTTGGTGGTAGA
GTTGGCCTTGCATATTCTTCTGTGGGTGTCCTCAAGATTGCTGTTGTTATTGCAACAAGA
TATTCTCTGCTACGCCAGCAATTTGGTCCTCCCAAACAACCTGAAGTTAGTATACTTGAC
TACCAATCTCAGCAGCACAAGCTTATGCCAATGTTGGCTTCAACTTACGCATTCCATTTT
GCCACACTGCATCTGGTGGAGAAATATTCTGAAATGAAGAAGTCTCGTGATGAAGAACTG
ATAGGGGATGTACATGCACTTTCGGCAGGGCTTAAGGCCTATATCACTTCTTACACAGCA
AAGTCATTGAGCACATGTAGAGAAGCTTGTGGCGGCCATGGTTATGCTGCTGTCAATAGG
TTTGGAAGTTTGAGGAATGATCATGACATATTTCAGACATTTGAGGGTGACAACACTGTT
CTTCTGCAGCAGGTAGCCGGTCTTCTATTGAAACAGTATGGGGAGAAATTCCGAGGTGGG
CAGCTCACTGTTACATGGAACTACCTAAGACAATCCATGAATTCTTACCTCGCTCAGCCT
AACCCAGTAACTGCTAGATGGGAAGGTGAAGCTCACCTACGAGATCCTAACTTCCAATTG
GATGCTTTTAGGTATCGTACGTCAAGATTGCTTCAAAGTGTAGCTATCCGGCTTCAGAAG
CACTCCAAGACTCTTGGAGGATTTGGTGCTTGGAATAGATGCTTAAATCACCTCTTGACG
CTTGCAGAGTCTCATATTGAATCCTTCATCCTTGAAAAATTCATTGAAGCTGTCAAGAAT
TGCCTTGATGAAAGCTCTCGTGCTGCCCTAAAACTCGTGTGTGATCTTTATGCCTTGGAT
AGAATCTGGAATGACATAGGAACTTACCGCAATGTGGACTACGTGGCTCCCAACAAAGCT
AAGGCAATTCACAAGTTAACAGAATATCTATGCTTCCAAGTTAAGAATGTCGCAAGGGAA
CTTGTTGACGCCTTTGATCTTCCAGATTATGTTACTCGTGCTCCAATCGGTGTGCAGGCT
GCATCAGAAGCTTATTCACAGTATACTCAGATTGTTGGTTTTTAG

Peptide Sequence

PEP ID

XP_016445936.1
PEP Infomation

PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal-like [Nicotiana tabacum]
Sequence

MELQKISSKGVQNTEENQETVNRRIQRLTLHLNPVQDITPVHLELLTCASGKAKTINVST
VTLSEYMRGKHRDIQEQVYAYFNSRPELQTPIEISKDEHRELCMKQLVGLVREGGIRPFR
YVAEDPAKYFAIAEAVGSVDMSLGIKMGVQYSLWGGSVINLGTKKHRDKYFNGIDNVDYP
GCFAMTELHHGSNVQGLQTIATFDPLTDEFIIDTPNDGALKWWIGNAAVHGKFATVFAKL
MLPTHDTKGVTDMGVHAFIVPIRDMKIHKTLPGVEIHDCGHKVGLNGVDNGALRFRSVRI
PRDNLLNRFGDVSRDGKYTSSLPSISKRFAATLGELVGGRVGLAYSSVGVLKIAVVIATR
YSLLRQQFGPPKQPEVSILDYQSQQHKLMPMLASTYAFHFATLHLVEKYSEMKKSRDEEL
IGDVHALSAGLKAYITSYTAKSLSTCREACGGHGYAAVNRFGSLRNDHDIFQTFEGDNTV
LLQQVAGLLLKQYGEKFRGGQLTVTWNYLRQSMNSYLAQPNPVTARWEGEAHLRDPNFQL
DAFRYRTSRLLQSVAIRLQKHSKTLGGFGAWNRCLNHLLTLAESHIESFILEKFIEAVKN
CLDESSRAALKLVCDLYALDRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLCFQVKNVARE
LVDAFDLPDYVTRAPIGVQAASEAYSQYTQIVGF

Transcript Sequence

Gene sequence data has not been registered.